Overview


Duration: 27 May - 07 June (9 days due to Queens Birthday on 2nd Monday) 

completedin progresson holdreviewto do
4154
7

(vs record 61 completed sprint 19)



Epic
Story
Owner
Deliverables
Link
Validation
  1. Help Sarah/Robin as needed
  2. HF/LF only (can run IM calc instead of BB)
  3. 150 fault, 100 realisations (Sarah to run)
  4. FD station (low priority)
  5. VM generation on median Srf

1) Done - need to teach Sarah how to use estimation

2) Possible to run IM calc for HF/LF only runs

5) Median srfs created for perturbated srf generation


Cybershake

Run Cybershake

Jason

1) HF investigation


CS v19p5 Run Log
Slurm Workflow

Task Management Changes:

  1. Autosubmit wrapper to manage "one realisation per fault" tasks e.g. VM Gen / Empirical / Rrup - with configuration file
  2. On error create a new task if the number retry count of the task is > RETRY_COUNT_MAX
  3. HF DT fix for estimation
  4. Investigate Area NHM vs SRF
  5. Empirical pseudo validation
  6. Subduction srf plots / MW scaling
  7. Shallow crustal on 5.4.2
  8. Hikurangi
  9. Long E2E test per sprint
  10. Delete EMOD3D restart files on successful simulation

Added new E2E test setup for 18.5.3.4 and seed sanity checking

James, Jason

1)Autosubmit/queue monitor wrapper made. Rrup re enabled in automated workflow.
2) Done

3) Done

4) Done - plot changed Karim happy

5) Not done

6) Progress done - Still outstanding

7) Not done

8) Note Done

9)Added e2etest for wrapper restart. Creating test data for high realisation count run. Data ready for a mini-cybershake style run. Issue found with Maui node causing issues however.

10) Done

1) Auto submit wrapper

2) Error retry mechanism

SeisFinder

Design modular architecture

Refactor the current backend code following the new architecture

Make hazard computed on-the-fly

Support user-specified IM/exceedance for disaggregation


Design authentication/authorization logic


Viktor / Claudio / Daniel

Backend interface completed

Hazard calculation refactoring (almost completed) and computation is well-separated from web

Auth0 tested


SeisFinder Architecture
Test

Empirical tests

  • Bradley_2013_sa
  • CampbellBozorgina_2012
  • AfshariStewart_2016
  • Zhao_2006

Melody

Jason

James

Python codes tested against matlab code–OK

Pickled verified python codes as benchmark data

Developed unit tests for the 4 GMM_models


Ground failure

Generate lots of data

James/Jason

Amelia happy

Issue with float rounding of lat/lon which resulted in reduced points. Bug fixed


IM_Calc
  • Vahid's integration for Advanced IMs

Refactor of source to site distance calculations

Python-TCL integration for OpenSees models

Tidy up source-site calculations


Jason

Claudio


1 Advanced IM workflow up to date.

Should be able to get other IMs up to standard. And should be able to run advanced IM_calc from standard IM_calc workflow very soon.



Bug fixes

Dashboard crash due to None returned by ssh cmd

Allocation period for Maui/Mahuika

Preventing filter resets on page refresh

Melody

Jason

Added check for unsuccessful ssh cmd, skip and retry after a sleep interval

Updated new allocation period

Extended page refresh interval to allow user to have enough time to read

http://hypocentre:8050/


Misc

1) Help Karim generate hazard as required

2) Fix Travis

3) R_X (low priority)

4) Mgmt db performance



1)Done - new request came in
2) Resolved issue relating to test data downloading
3) Not Done

4) Investigating database access issues with large run


 



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