Overview

48 tasks: 19 completed, 22 to do, 7 in progress

 

Deliverables

Code
Story
Deliverables
Link
CS18p6

Successfully deployed hazard calculation code on Mahuika
Computing all locations for each IM type takes < 2 hours

Setting up was very complicated, but now simplified

 

 

 

SeisFinder Command Line Tools

Automated Simulation validation using empirical

CS18p9Run v18p9 on New HPC ( Maui/Mahuika ) Cybershake 18p9
Data Sharing

For restricted access control, a new config file format is created which enables selection of a subset of simrungroup and simruns from the DB.

 Based on the version used, now the admin has the control to select the simrungroups and simruns which are allowed to the user.

 

SeisFinder2 - config file

Misc.

Identify params*.py usage to prepare for the versioning of params.py

Removed some params from params.py and set_runparams.py. Tested

Had a basic params.yaml file

 

 

Versioning params*.py

 

Migration

Compiled GMT on mahuika

Compiled EMOD3D on Maui

Fixed python module loading between Maui and Mahuika

Building GMT on Mahuika

    
GM selectionRun both getGCIMdistributionsFromSimulationBasedPsha and semi_automatic_selection
to get same results in Python as Matlab (text outputs)		First part complete, second part producing output,
need to check missing options in scipy kstest
and verify second output is the same [in progress]		https://github.com/ucgmsim/gm_selection
(all new code)

 


Review on incomplete items

 

 

  SummaryStatusCreatedUpdatedAssigneeT 
QSW-439Codebase

Review Documentation

TO DO15/Oct/1817/Oct/18Melody ZhuTaskActions
QSW-468CS18p6

plot ratios of empirical and ratios and calculate average

TO DO18/Oct/1818/Oct/18UnassignedTaskActions
QSW-447CS18p6

Consolidate all simulations on Maui

TO DO16/Oct/1816/Oct/18UnassignedTask 
QSW-446CS18p6

Plot one realisation of every fault

TO DO16/Oct/1816/Oct/18UnassignedTask 
QSW-325CS18p6

Compare with 18.5/4

TO DO22/Aug/1815/Oct/18UnassignedTask 
QSW-467CS18p6

Calculate Emprical for every 1st realisation in cybershake fault

IN PROGRESS18/Oct/1825/Oct/18Jason MothaTask 
QSW-219CS18p6

create CyberShake fault file for hazard calculations

IN PROGRESS03/Jul/1817/Oct/18Jonney HuangTask 
QSW-451CS18p9

IM plotting on Mahuika

TO DO17/Oct/1817/Oct/18UnassignedTask 
QSW-450CS18p9

Permission issue on generated VMs

TO DO17/Oct/1817/Oct/18UnassignedTask 
QSW-441CS18p9

WCT Estimation for BB & IMCalc

TO DO16/Oct/1817/Oct/18UnassignedTask 
QSW-434CS18p9

Option to clean up HF and LF after BB

TO DO09/Oct/1817/Oct/18UnassignedTask 
QSW-431CS18p9

Fix batching in slurm submission

TO DO05/Oct/1817/Oct/18Jonney HuangTask 
QSW-435CS18p9

Slurm script generation for SRF/VM/plotting

IN PROGRESS10/Oct/1819/Oct/18Jason MothaTask 
QSW-457Data sharing

Wikipage documenting the .ini format for access control

TO DO17/Oct/1817/Oct/18sharmila savarimuthuTask 
QSW-415Data sharing

Prepare test cases for argument version to be tested (scenario tests)

IN PROGRESS03/Oct/1815/Oct/18sharmila savarimuthuTask 
QSW-383Data sharing

Web version to match CLI

IN PROGRESS19/Sep/1817/Oct/18sharmila savarimuthuStory 
QSW-313Empirical Engine

RTVZ Boundry Checking

TO DO22/Aug/1817/Oct/18UnassignedTask 
QSW-251Empirical Engine

generate slurm script

TO DO11/Jul/1817/Oct/18UnassignedTask 
QSW-181Empirical Engine

Orchestration to compute IMs and output files for all simulations in a set

TO DO20/Jun/1817/Oct/18UnassignedTask 
QSW-352GM Selection

Adjust for our workflow

IN PROGRESS23/Aug/1829/Oct/18Viktor PolakTask 
QSW-455HPCF Migration

Verify computations on Maui

TO DO17/Oct/1817/Oct/18UnassignedTask 
QSW-425HPCF Migration

Test srfgen and vmgen

TO DO03/Oct/1817/Oct/18UnassignedTask 
QSW-200HPCF Migration

Verify IM plots on Mahuika

TO DO21/Jun/1817/Oct/18UnassignedTask 
QSW-424HPCF Migration

Port GMT (and workflow / plottingdata) to Mahuika

IN PROGRESS03/Oct/1819/Oct/18UnassignedTask 
QSW-210IMCalc

Calculate rrups for only one realisation in a simulation.

TO DO27/Jun/1817/Oct/18UnassignedTask 
QSW-466Sim Workflow

Change SRF generation code to handle more uncertainties

TO DO17/Oct/1817/Oct/18Viktor PolakTask 
QSW-409Sim Workflow

Make srf_info contains enough data to reproduce exact same module.

TO DO21/Sep/1815/Oct/18UnassignedTask 
QSW-390Sim Workflow

Introduce version number for GM sim

TO DO19/Sep/1829/Oct/18Melody ZhuStory 
QSW-262Sim Workflow

All simulation meta data should be kept in a single file (hdf5/json), so that they can be conveniently accessed

TO DO25/Jul/1817/Oct/18UnassignedStory 

 

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