4. Create dummy templates for each level of yaml annd Clean up

Background:

New Cybershake install structure (realization/[HF|LF|BB]) with yaml only and params*.py removed (prams_vel.py.template and params.py.template still present because they are not genareted by install) now available.

Parameter Folder Structure: Parameters and locations in new folder hierarchy

Tasks: 

1. Clean up the manual workflow and testing code.  1d
2. Then merge params branch into master and do benchmark testing   6h
3. Create dummy templates for each level of yaml     6h
4. Discuss dummy templates with team      2h
5. Create functionalities to revtrive dummpy templates by user specified verison  4h
6. Benchmark testing 4h
7. merge Jonney's folder_restruck into params branch 3h
8. Modify params branch acoording to pull request comments 6h
9. Benchmark testing 4h

Dev locaiton:

Currently under yaml_template branch of slurm_gm_workflow  

Progress:

 1-9 all done. Currently only find defaults in root_params.yaml

Sample dummy template:

slurm_gm_workflow/templates/gmsim/16.1/root_defaults.yaml

hf:
  hf_dt: 0.005
  hf_rvfac: 0.8
  hf_sdrop: 50
  hf_path_dur: 1
  hf_kappa: 0.045
bb:
  site_specific: false
  fmin: 0.2
  fmidbot: 0.5
flo: 0.25

Todo:

check with jonney about BB.bin and e3d binarys as they are not the same as benchmark. stations in BB.bin is not the same as benchmark. Maybe because of the changes to bb_sim.py

Add more defaults according to researchers' request

make the automatic workflow work.