Yellow: to be decided/changed
Red: to be deleted
Generic Parameters
Nesi | Root | Data | Runs | Fault | realization | LF/HF /BB/IM_Calc | Note | Example | |
---|---|---|---|---|---|---|---|---|---|
mgmt_db_location | The same for all faults. Same as the path to Root - unsure if needed | /home/melody.zhu/Albury/ | |||||||
version | Selected during install | gmsim_v18.5.3 | |||||||
stat_coords | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/fd_rt01-h0.400.statcords | ||||||||
flo | default | 0.25 | |||||||
srf_dir | /home/melody.zhu/Albury/Data/Sources/ | ||||||||
srf_file | /home/melody.zhu/Albury/Data/Sources/Albury/Srf/Albury_HYP15-21_S1384.srf | ||||||||
sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128 | ||||||||
bb_dir | (Unneeded - sim_dir/ + 'BB') | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/BB | |||||||
lf_sim_root_dir | (Unneeded - sim_dir/ + 'LF') | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF | |||||||
hf_dir | (Unneeded - sim_dir/ + 'HF') | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/HF | |||||||
vel_mod_dir | /home/melody.zhu/Albury/Data/VMs/Albury | ||||||||
tools_dir | /nesi/project/nesi00213/EMOD3D/tools | ||||||||
run_name | Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128 | ||||||||
FD_STATLIST | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/fd_rt01-h0.400.ll | ||||||||
stat_file | /nesi/project/nesi00213/StationInfo/non_uniform_whole_nz_with_real_stations-hh400_v18p6.ll | ||||||||
Nesi | Root | Data | Runs | Fault | realization | LF/HF /BB/IM_Calc | Note | Example | |
global_root | /nesi/project/nesi00213 | ||||||||
user_root | Potential Remove | /home/melody.zhu/Albury | |||||||
run_dir | Potential Remove | /nesi/nobackup/nesi00213/RunFolder/ | |||||||
stat_vs_est | /nesi/project/nesi00213/StationInfo/non_uniform_whole_nz_with_real_stations-hh400_v18p6.vs30 | ||||||||
stat_vs_ref | /nesi/project/nesi00213/StationInfo/non_uniform_whole_nz_with_real_stations-hh400_v18p6.vs30ref | ||||||||
v_mod_1d_dir | /nesi/project/nesi00213/VelocityModel/Mod-1D | ||||||||
dt | |||||||||
sim_duration |
EMOD3D Related Parameters
All defaults stored in e3d.par.template
non-default params to be garnered from other params.yaml files
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
---|---|---|---|---|---|---|---|---|---|
all_in_one | Default | 1 | |||||||
bfilt | Default | 4 | |||||||
bforce | Default | 0 | |||||||
dampwidth | Default | 0 | |||||||
dblcpl | Default | 0 | |||||||
dmodfile | Default | rho3dfile.d | |||||||
pmodfile | Default | vp3dfile.p | |||||||
smodfile | Default | vs3dfile.s | |||||||
dt | 0.02 | ||||||||
dtts | Default | 20 | |||||||
dxts | Default | 5 | |||||||
dyts | Default | 5 | |||||||
dzts | Default | 1 | |||||||
dump_itinc | Default | 4000 | |||||||
dxout | Default | 1 | |||||||
dyout | Default | 1 | |||||||
dzout | Default | 1 | |||||||
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
elas_only | Default | 0 | |||||||
enable_output_dump | Default | 1 | |||||||
enable_restart | Default | 1 | |||||||
faultfile | (srf_file as above) | /home/melody.zhu/Albury/Data/Sources/Albury/Srf/Albury_HYP15-21_S1384.srf | |||||||
ffault | Default | 2 | |||||||
fhi | Default | 0.0 | |||||||
flo | as above | 0.25 | |||||||
fmax | Default | 25 | |||||||
fmin | Default | 0.01 | |||||||
freesurf | Default | 1 | |||||||
geoproj | Default | 1 | |||||||
global_root | (as above) | /nesi/project/nesi00213 | |||||||
h | (from hh vm params) | 0.4 | |||||||
intmem | Default | 1 | |||||||
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
ix_ts | Default | 99 | |||||||
ix_ys | Default | 100 | |||||||
ix_zs | Default | 100 | |||||||
iy_ts | Default | 2 | |||||||
iy_xs | Default | 60 | |||||||
iy_zs | Default | 50 | |||||||
iz_ts | Default | 1 | |||||||
iz_xs | Default | 1 | |||||||
iz_ys | Default | 1 | |||||||
logdir | Autogenerated from sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/Rlog | |||||||
lonlat_out | Default | 1 | |||||||
main_dump_dir | Autogenerated from sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/OutBin | |||||||
maxmem | Default | 1500 | |||||||
model_params | Autogenerated | /home/melody.zhu/Albury/Data/VMs/Albury/model_params_rt01-h0.400 | |||||||
model_style | Default | 1 | |||||||
modellat | MODEL_LAT | -44.1301395408 | |||||||
modellon | MODEL_LON | 170.711376933 | |||||||
modelrot | MODEL_ROT | 43.0 | |||||||
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
n_proc | Default Test to remove from e3d.par | 512 | |||||||
name | run_name | Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128 | |||||||
nseis | Default | 1 | |||||||
nt | Calculated | 4365 | |||||||
nx | NX | 517 | |||||||
ny | NY | 501 | |||||||
nz | NZ | 105 | |||||||
order | Default | 4 | |||||||
pointmt | Default | 0 | |||||||
qbndmax | Default | 100.0 | |||||||
qpfrac | Default | 100 | |||||||
qpqs_factor | Default | 2.0 | |||||||
qsfrac | Default | 50 | |||||||
read_restart | Default | 0 | |||||||
report | Default | 100 | |||||||
restart_itinc | Default | 20000 | |||||||
restartdir | Autogenerated from sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/Restart | |||||||
restartname | run_name | Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128 | |||||||
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
scale | Default | 1 | |||||||
seiscords | stat_coords | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/fd_rt01-h0.400.statcords | |||||||
seisdir | Autogenerated from sim_dir | /home/melody.zhu/Albury/scratch/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/Albury_HYP15-21_S1384/SeismoBin | |||||||
sim_dir | Autogenerated from sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128 | |||||||
slipout | Autogenerated from sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/SlipOut/slipout-k2 | |||||||
span | Default | 1 | |||||||
stat_file | stat_file | /nesi/project/nesi00213/StationInfo/non_uniform_whole_nz_with_real_stations-hh400_v18p6.ll | |||||||
stype | Default | 2tri-p10-h20 | |||||||
swap_bytes | Default | 0 | |||||||
ts_file | Autogenerated from sim_dir + run_name | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/OutBin/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128_xyts.e3d | |||||||
ts_inc | Default | 1 | |||||||
ts_out_dir | Autogenerated from sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/TSlice/TSFiles | |||||||
ts_out_prefix | Autogenerated from sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/TSlice/TSFiles/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128 | |||||||
ts_start | Default | 0 | |||||||
ts_total | Default | 218 | |||||||
ts_xy | Default | 1 | |||||||
ts_xz | Default | 0 | |||||||
ts_yz | Default | 0 | |||||||
tzero | Default | 0.6 | |||||||
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
user_scratch | Autogenerated from sim_dir | /home/melody.zhu/Albury/scratch | |||||||
vel_mod_params_dir | (same as above) | /home/melody.zhu/Albury/Data/VMs/Albury | |||||||
version | Default | 3.0.4-mpi | |||||||
vmoddir | (same as params dir?) | /home/melody.zhu/Albury/Data/VMs/Albury | |||||||
vmodel_swapb | Default | 0 | |||||||
wcc_prog_dir | (same as tools_dir) | /nesi/project/nesi00213/EMOD3D/tools | |||||||
xseis | Default | 0 | |||||||
yseis | Default | 0 | |||||||
zseis | Default | 0 |
VM Related Parameters
(params_vm.yaml stored in Data/VMs)
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
---|---|---|---|---|---|---|---|---|---|
MODEL_LAT | -44.1301395408 | ||||||||
MODEL_LON | 170.711376933 | ||||||||
MODEL_COORDS | model_coords_rt01-h0.400 | ||||||||
MODEL_BOUNDS | model_bounds_rt01-h0.400 | ||||||||
MODEL_ROT | 43 | ||||||||
MODEL_PARAMS | model_params_rt01-h0.400 | ||||||||
GRIDFILE | gridfile_rt01-h0.400 | ||||||||
GRIDOUT | gridout_rt01-h0.400 | ||||||||
nz | 0.5 | ||||||||
nx | 517 | ||||||||
ny | 501 | ||||||||
hh | 0.4 | ||||||||
vel_mod_params_dir | vel_mod_dir | /home/melody.zhu/Albury/Data/VMs/Albury | |||||||
sufx | _rt01-h0.400 |
LF Related Parameters
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
---|---|---|---|---|---|---|---|---|---|
ts_out_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/TSlice/TSFiles | ||||||||
t_slice_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/TSlice | ||||||||
ts_out_prefix | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/TSlice/TSFiles/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128 | ||||||||
lf_sim_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF | ||||||||
lf_vel_resume | true | ||||||||
SEISDIR | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/OutBin | ||||||||
FILELIST | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/fdb.filelist | ||||||||
slipout_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/SlipOut | ||||||||
log_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/Rlog | ||||||||
vel_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/Vel | ||||||||
ts_file | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/OutBin/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128_xyts.e3d | ||||||||
plot_ps_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/TSlice/PlotFiles | ||||||||
plot_png_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/TSlice/Png | ||||||||
restart_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/Restart | ||||||||
bin_output | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/LF/OutBin |
HF Related Parameters
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
---|---|---|---|---|---|---|---|---|---|
hf_rvfac | default | 0.8 | |||||||
hf_sdrop | default | 50 | |||||||
hf_prefix | hf | ||||||||
hf_sim_bin | /nesi/project/nesi00213/EMOD3D/tools/hb_high_v5.4.5_np2mm+ | ||||||||
hf_path_dur | default | 1 | |||||||
hf_dt | default | 0.005 | |||||||
hf_slip | (HF) | /home/melody.zhu/Albury/Data/Sources/Albury/Stoch/Albury_HYP15-21_S1384.stoch | |||||||
hf_kappa | default | 0.045 |
BB Related Parameters
Nesi | Root | Data | Runs | Fault | realization | LF/HF/BB/IM_Calc | Note | Example | |
---|---|---|---|---|---|---|---|---|---|
v_mod_1d_name | Change to full path of 1-d model | Cant1D_v2-midQ_leer | |||||||
hf_resume | Always True | true | |||||||
hf_acc_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/HF/Acc | ||||||||
hf_run_name | run_name ???not the same as run_name | Cant1D_v2-midQ_leer_hfnp2mm+_rvf0p8_sd50_k0p045 | |||||||
site_specific | default | false | |||||||
bb_resume | Always True | true | |||||||
hf_v_model | Same as 1st param | /nesi/project/nesi00213/VelocityModel/Mod-1D/Cant1D_v2-midQ_leer.1d | |||||||
hf_veldir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/HF/Cant1D_v2-midQ_leer_hfnp2mm+_rvf0p8_sd50_k0p045/Vel | ||||||||
bb_acc_dir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/BB/Cant1D_v2-midQ_leer_hfnp2mm+_rvf0p8_sd50_k0p045/Acc | ||||||||
bb_veldir | /home/melody.zhu/Albury/Albury_VM_home_melodypzhu_Albury_Data_VMs_Albury-h0p4_EMODv3p0p4_181128/BB/Cant1D_v2-midQ_leer_hfnp2mm+_rvf0p8_sd50_k0p045/Vel |
Verification Related Parameters
Root | Data | Runs | Faults | Realizations | Calc | Note | |
---|---|---|---|---|---|---|---|
empirical version | |||||||